Structural Bioinformatics Group

contact

Joachim von Eichborn, M.Sc. Bioinformatics

Lindenberger Weg 80
13125 Berlin

email: joachim.eichborn[AT]charite.de
telephone: +49-(0)30-450-540-759

publications

Hecker N., Ahmed J., von Eichborn, J., Dunkel M., Macha L., Eckert A., Gilson M. K., Bourne P. E. and Preissner R.
SuperTarget goes quantitative: Update on drug-target interactions
Nucleic Acids Res. 40(Database issue): D1113-7 (2012) IF: 7.836 [PDF]

Woelke A. L., von Eichborn J., Murgueitio M., Worth C. L., Castiglione F. and Preissner R.
Development of Immune-Specific Interaction Potentials and Their Application in the Multi-Agent-System VaccImm.
PLoS ONE 6:e23257 (2011) [PDF]

von Eichborn J., Bourne P. E. and Preissner R.
Cobweb: a Java applet for network exploration and visualisation
Bioinformatics 27(12): 1725-6 (2011) [link]

von Eichborn J., Murgueitio M. S., Dunkel M., Koerner S., Bourne P. E. and Preissner R.
PROMISCUOUS: A database for network-based drug-repositioning
Nucleic Acids Res 39(Database issue): D1060-6. (2011) [PDF]

von Eichborn J., Günther S. and Preissner R.
Structural Features and Evolution of Protein-Protein Interactions.
Genome Inform 22: 1-10. (2010) [PDF]

Günther S., von Eichborn J., May P. and Preissner R.
JAIL: a structure-based interface library for macromolecules.
Nucleic Acids Res 37(Database issue): D338-41. (2009) [PDF]

conference presentations

von Eichborn J., Bourne P. E. and Preissner R.
Cobweb: Interactive Visualisation of Networks.
Poster presentation, International Conference on Systems Biology 2011, Mannheim/Heidelberg, Germany

von Eichborn J., Bourne P. E. and Preissner R.
Cobweb: Interactive Visualisation of Networks.
Oral and poster presentation, International Workshop on Bioinformatics and Systems Biology 2011, Humboldt Universität zu Berlin, Berlin, Germany

von Eichborn J., Murgueitio M. S., Dunkel M., Koerner S., Bourne P. E. and Preissner R.
PROMISCOUS: A resource to explore drug-target relationships.
Poster presentation, German Conference on Bioinformatics 2010, TU Braunschweig, Braunschweig, Germany

von Eichborn J., Günther S. and Preissner R.
Structural and evolutionary features of protein-protein interaction sites
Oral presentation, Workshop on Genomics and Systems Biology of Molecular Networks 2010, Hiddensee, Germany

von Eichborn J., Günther S., Jaeger I. S., Brenke R., Vajda S. and Preissner R.
A knowledge-based approach for predicting protein interaction sites.
Poster presentation, International Workshop on Bioinformatics and Systems Biology 2009, Boston University, Boston, USA

von Eichborn J., Duarte J., Stehr H. and Lappe M.
A network approach to literature management.
Poster presentation, RECOMB Satellite on Regulatory Genomics, 2007 MIT / Broad Institute / CSAIL, Boston, USA